MSGene

MSGene - Polymorphism Details

Study:

Kantarci, 2004

Gene:

FAS (ALPS1A; APO-1; APT1; CD95; FAS1; FASTM; TNFRSF6) View on AlzGene

Protein:

Fas (TNF receptor superfamily, member 6)(APO-1 cell surface antigen; CD95 antigen; Fas AMA; Fas antigen; apoptosis antigen 1; tumor necrosis factor receptor superfamily, member 6)

Chromosome:

10 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 3

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian
rs1800682 (-670A/G-MvaI)	USA	MS CTR	0.42 0.46	0.58 0.54	37 (0.170) 86 (0.195)	108 (0.495) 234 (0.531)	73 (0.335) 121 (0.274)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Caucasian
rs2234978 (74C/T)	USA	MS CTR	0.26 0.33	0.74 0.67	17 (0.079) 48 (0.110)	79 (0.367) 193 (0.441)	119 (0.553) 197 (0.450)

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian
rs3218612 (26A/G)	USA	MS CTR	0.04 0.04	0.96 0.96	0 (0.000) 0 (0.000)	9 (0.074) 21 (0.086)	113 (0.926) 223 (0.914)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

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