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MSGene - Polymorphism Details
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 Study: Beyeen, 2010
 Gene: IL22RA2  (CRF2-10; CRF2-S1; CRF2X; IL-22BP; MGC150509; MGC150510)  Entrez Gene
 Protein: interleukin 22 receptor, alpha 2  (class II cytokine receptor; interleukin 22-binding protein)  ProteinLink
 Chromosome: 6   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 25 November 2011
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 18

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs10484798 Sweden MS
CTR
0.01
0.02
0.99
0.98
0 (0.000)
0 (0.000)
54 (0.029)
54 (0.032)
1817 (0.971)
1627 (0.968)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele C-Allele A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
 Caucasian
rs12664889 Sweden MS
CTR
0.14
0.15
0.86
0.85
31 (0.017)
37 (0.022)
452 (0.247)
409 (0.247)
1347 (0.736)
1207 (0.730)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs276466 Sweden MS
CTR
0.23
0.23
0.77
0.77
108 (0.061)
98 (0.059)
588 (0.331)
559 (0.337)
1081 (0.608)
1002 (0.604)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs10457018 Sweden MS
CTR
0.17
0.16
0.83
0.84
46 (0.025)
40 (0.024)
528 (0.286)
444 (0.269)
1270 (0.689)
1169 (0.707)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele A-Allele T/T
(frequency)
T/A
(frequency)
A/A
(frequency)
 Caucasian
rs12194034 Sweden MS
CTR
0.17
0.16
0.83
0.84
48 (0.026)
44 (0.026)
512 (0.281)
453 (0.269)
1261 (0.692)
1190 (0.705)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   m-Allele M-Allele m/m
(frequency)
m/M
(frequency)
M/M
(frequency)
 Caucasian
rs13217897 Sweden MS
CTR
0.45
0.48
0.55
0.52
379 (0.205)
372 (0.224)
914 (0.495)
860 (0.518)
552 (0.299)
428 (0.258)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs17066107 Sweden MS
CTR
0.04
0.04
0.96
0.96
4 (0.002)
4 (0.002)
153 (0.081)
116 (0.069)
1734 (0.917)
1565 (0.929)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   m-Allele M-Allele m/m
(frequency)
m/M
(frequency)
M/M
(frequency)
 Caucasian
rs1961618 Sweden MS
CTR
0.45
0.44
0.55
0.56
350 (0.190)
323 (0.193)
945 (0.512)
830 (0.495)
551 (0.298)
524 (0.312)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs202562 Sweden MS
CTR
0.06
0.05
0.94
0.95
7 (0.004)
7 (0.004)
207 (0.109)
166 (0.098)
1683 (0.887)
1519 (0.898)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   m-Allele M-Allele m/m
(frequency)
m/M
(frequency)
M/M
(frequency)
 Caucasian
rs202563 Sweden MS
CTR
0.17
0.17
0.83
0.83
39 (0.021)
46 (0.027)
560 (0.298)
475 (0.283)
1281 (0.681)
1157 (0.690)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele C-Allele A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
 Caucasian
rs202566 Sweden MS
CTR
0.01
0.02
0.99
0.98
0 (0.000)
0 (0.000)
49 (0.026)
53 (0.032)
1825 (0.974)
1623 (0.968)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs2038610 Sweden MS
CTR
0.16
0.16
0.84
0.84
43 (0.023)
45 (0.027)
512 (0.272)
464 (0.275)
1330 (0.706)
1178 (0.698)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   m-Allele M-Allele m/m
(frequency)
m/M
(frequency)
M/M
(frequency)
 Caucasian
rs276474 Norway MS
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs276474 Sweden MS
CTR
0.45
0.48
0.55
0.52
362 (0.204)
377 (0.224)
880 (0.497)
875 (0.521)
530 (0.299)
429 (0.255)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs580397 Sweden MS
CTR
0.16
0.16
0.84
0.84
44 (0.024)
42 (0.025)
486 (0.263)
451 (0.271)
1317 (0.713)
1170 (0.704)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   m-Allele M-Allele m/m
(frequency)
m/M
(frequency)
M/M
(frequency)
 Caucasian
rs72761 Sweden MS
CTR
0.46
0.49
0.54
0.51
403 (0.213)
399 (0.236)
941 (0.497)
869 (0.513)
548 (0.290)
426 (0.251)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele C-Allele G/G
(frequency)
G/C
(frequency)
C/C
(frequency)
 Caucasian
rs85462 Sweden MS
CTR
0.24
0.23
0.76
0.77
120 (0.065)
98 (0.059)
662 (0.360)
570 (0.345)
1059 (0.575)
982 (0.595)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs9484001 Sweden MS
CTR
0.14
0.14
0.86
0.86
32 (0.017)
35 (0.021)
468 (0.248)
417 (0.248)
1386 (0.735)
1230 (0.731)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs9494674 Sweden MS
CTR
0.14
0.15
0.86
0.85
34 (0.018)
40 (0.024)
466 (0.253)
419 (0.250)
1345 (0.729)
1217 (0.726)
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MSGene Recent Updates
MSGene Top Results
Top Results Details
1. HLA-DRB1
2. IL2RA
3. IL7R
4. TAGAP
5. CLEC16A
6. EVI5
7. GWA_16q24.1
8. GWA_5p13.1
9. TTC34
10. AHI1   
[see more]
MSGene Stats
Studies: 789
Genes: 809
Polymorphisms: 2907
Meta-analyses: 324
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