MSGene

MSGene - Meta-Analysis of All Published MS Association Studies (Case-Control Only) rs17824933

Polymorphism:

rs17824933

Gene:

CD6 (FLJ44171; TP120)

Protein:

CD6 molecule (CD6 antigen; T-cell differentiation antigen CD6; T12)

Chromosome:

11 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Polymorphism:

1) Summary of Allele and Genotype Distribution of all Published Association Studies (by Ethnic Group)
			Alleles		Genotypes
	# Case-Control Samples		G-Allele (frequency)	C-Allele (frequency)	G/G (frequency)	G/C (frequency)	C/C (frequency)
Caucasian	16	MS CTR	0.25 0.23	0.75 0.77	841 (0.062) 721 (0.055)	5006 (0.369) 4578 (0.349)	7737 (0.570) 7802 (0.596)
Other/Mixed	1	MS CTR	0.05 0.03	0.95 0.97	1 (0.005) 0 (0.000)	19 (0.096) 13 (0.066)	177 (0.898) 183 (0.934)
Total	17	MS CTR	0.24 0.23	0.76 0.77	842 (0.061) 721 (0.054)	5025 (0.365) 4591 (0.345)	7914 (0.574) 7985 (0.601)

Meta-Analysis Methods * New * Cumulative Meta-analysis

2) Forest plot for polymorphism rs17824933

Please also see disclaimer for more information on these meta-analyses.

Meta-analyses have not been performed on the following polymorphisms since they lack published genotype data in at least four independent case-control samples, or the published genotype data was otherwise not eligible for inclusion (see methods for details):

rs11230563

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