MSGene

MSGene - Meta-Analysis of All Published MS Association Studies (Case-Control Only) rs6133

Polymorphism:

rs6133 (L640V)

Gene:

SELP (RP1-86F14.2; CD62; CD62P; FLJ45155; GMP140; GRMP; LECAM3; PADGEM; PSEL)

Protein:

selectin P (granule membrane protein 140kDa, antigen CD62) (OTTHUMP00000032609; granulocyte membrane protein; leukocyte-endothelial cell adhesion molecule 3; platelet alpha-granule membrane protein; selectin P)

Chromosome:

1 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Polymorphism:

1) Summary of Allele and Genotype Distribution of all Published Association Studies (by Ethnic Group)
			Alleles		Genotypes
	# Case-Control Samples		T-Allele (frequency)	G-Allele (frequency)	T/T (frequency)	T/G (frequency)	G/G (frequency)
Caucasian	2	MS CTR	0.13 0.14	0.87 0.86	7 (0.024) 2 (0.010)	59 (0.206) 51 (0.256)	221 (0.770) 146 (0.734)
Total	2	MS CTR	0.13 0.14	0.87 0.86	7 (0.024) 2 (0.010)	59 (0.206) 51 (0.256)	221 (0.770) 146 (0.734)

Meta-Analysis Methods * New * Cumulative Meta-analysis

2) Forest plot for polymorphism rs6133 (L640V)

Please also see disclaimer for more information on these meta-analyses.

Meta-analyses have not been performed on the following polymorphisms since they lack published genotype data in at least four independent case-control samples, or the published genotype data was otherwise not eligible for inclusion (see methods for details):

rs6131 (S330N)
rs6136 (T715P)
SELP_2123C/G

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