MSGene

MSGene - Meta-Analysis of All Published MS Association Studies (Case-Control Only) rs1133400

Polymorphism:

rs1133400 (rs3818511)

Gene:

INPP5A (RP11-288G11.1; 5PTASE; DKFZp434A1721; MGC116947; MGC116949) View on SZGene

Protein:

inositol polyphosphate-5-phosphatase, 40kDa(43 kDa inositol polyphosphate 5-phophatase; CTCL tumor antigen HD-CL-02; InsP3 5-phosphatase; inositol polyphosphate-5-phosphatase A; inositol trisphosphate-5-phosphatase, 40kD; type I inositol-1,4,5-trisphosphate 5-phophatase; type I inositol-1,4,5-trisphosphate 5-phosphatase)

Chromosome:

10 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Polymorphism:

1) Summary of Allele and Genotype Distribution of all Published Association Studies (by Ethnic Group)
			Alleles		Genotypes
	# Case-Control Samples		G-Allele (frequency)	A-Allele (frequency)	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian	3	MS CTR	0.22 0.21	0.78 0.79	71 (0.048) 77 (0.041)	494 (0.335) 636 (0.341)	909 (0.617) 1153 (0.618)
Total	3	MS CTR	0.22 0.21	0.78 0.79	71 (0.048) 77 (0.041)	494 (0.335) 636 (0.341)	909 (0.617) 1153 (0.618)

Meta-Analysis Methods * New * Cumulative Meta-analysis

2) Forest plot for polymorphism rs1133400 (rs3818511)

Please also see disclaimer for more information on these meta-analyses.

Meta-analyses have not been performed on the following polymorphisms since they lack published genotype data in at least four independent case-control samples, or the published genotype data was otherwise not eligible for inclusion (see methods for details):

rs1133400 (rs3818511)

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