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MSGene - Polymorphism Details
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 Study: Ma, 2011
 Gene: MERTK  (MER; RP38; c-mer)  Entrez Gene
 Protein: c-mer proto-oncogene tyrosine kinase  (MER receptor tyrosine kinase; STK kinase; proto-oncogene c-Mer; receptor tyrosine kinase MerTK; tyrosine-protein kinase Mer)  ProteinLink
 Chromosome: 2   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 25 November 2011
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 17

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele G-Allele T/T
(frequency)		 T/G
(frequency)		 G/G
(frequency)
 Caucasian
rs867311 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs867311 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs7568632 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs7568632 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.22
0.25		 0.78
0.75		 57 (0.050)
72 (0.063)		 395 (0.346)
430 (0.377)		 688 (0.604)
638 (0.560)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs6730521 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs6730521 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.22
0.23		 0.78
0.77		 54 (0.047)
61 (0.054)		 387 (0.339)
406 (0.356)		 699 (0.613)
672 (0.590)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs4848901 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs4848901 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.47
0.45		 0.53
0.55		 249 (0.218)
228 (0.200)		 568 (0.498)
564 (0.494)		 324 (0.284)
349 (0.306)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele G-Allele C/C
(frequency)		 C/G
(frequency)		 G/G
(frequency)
 Caucasian
rs4528767 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs4528767 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele C-Allele G/G
(frequency)		 G/C
(frequency)		 C/C
(frequency)
 Caucasian
rs4434006 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs4434006 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.23
0.26		 0.77
0.74		 58 (0.051)
76 (0.067)		 399 (0.350)
436 (0.382)		 683 (0.599)
628 (0.551)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs4278932 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs4278932 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.23
0.26		 0.77
0.74		 59 (0.052)
79 (0.069)		 400 (0.351)
442 (0.388)		 681 (0.597)
619 (0.543)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele C-Allele A/A
(frequency)		 A/C
(frequency)		 C/C
(frequency)
 Caucasian
rs3811632 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs3811632 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.26
0.27		 0.74
0.73		 79 (0.069)
85 (0.074)		 443 (0.389)
453 (0.397)		 618 (0.542)
603 (0.528)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs17835605 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs17835605 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.23
0.26		 0.77
0.74		 58 (0.051)
79 (0.069)		 399 (0.350)
442 (0.388)		 683 (0.599)
619 (0.543)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs17174870 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs17174870 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs1516640 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs1516640 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.48
0.46		 0.52
0.54		 263 (0.231)
237 (0.208)		 569 (0.499)
566 (0.496)		 308 (0.270)
337 (0.296)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   C-Allele T-Allele C/C
(frequency)		 C/T
(frequency)		 T/T
(frequency)
 Caucasian
rs1516629 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs1516629 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs1400325 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs1400325 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.23
0.26		 0.77
0.74		 59 (0.052)
76 (0.067)		 400 (0.351)
436 (0.382)		 681 (0.597)
628 (0.551)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs13419523 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs13419523 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.08
0.07		 0.92
0.93		 7 (0.006)
5 (0.004)		 162 (0.142)
141 (0.124)		 971 (0.852)
994 (0.872)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   T-Allele C-Allele T/T
(frequency)		 T/C
(frequency)		 C/C
(frequency)
 Caucasian
rs12477716 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs12477716 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.22
0.26		 0.78
0.74		 55 (0.048)
76 (0.067)		 391 (0.343)
436 (0.382)		 694 (0.609)
628 (0.551)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   A-Allele G-Allele A/A
(frequency)		 A/G
(frequency)		 G/G
(frequency)
 Caucasian
rs12469210 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs12469210 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.23
0.25		 0.77
0.75		 58 (0.051)
72 (0.063)		 399 (0.350)
430 (0.377)		 683 (0.599)
638 (0.560)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)		 Population   G-Allele A-Allele G/G
(frequency)		 G/A
(frequency)		 A/A
(frequency)
 Caucasian
rs11884641 Overlaps with IMSGC, 2011 (ANZ-GWAS) MS
CTR		 -
-		 -
-		 0 (-)
0 (-)		 0 (-)
0 (-)		 0 (-)
0 (-)
rs11884641 Overlaps with IMSGC, 2011 (Australia, New Zealand) MS
CTR		 0.23
0.26		 0.77
0.74		 61 (0.054)
78 (0.068)		 405 (0.355)
440 (0.386)		 674 (0.591)
623 (0.546)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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MSGene Stats
Studies: 789
Genes: 809
Polymorphisms: 2907
Meta-analyses: 324
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