MSGene

MSGene - Polymorphism Details

Study:

Beyeen, 2010

Gene:

IL22RA2 (CRF2-10; CRF2-S1; CRF2X; IL-22BP; MGC150509; MGC150510)

Protein:

interleukin 22 receptor, alpha 2 (class II cytokine receptor; interleukin 22-binding protein)

Chromosome:

6 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 18

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Caucasian
rs10484798	Sweden	MS CTR	0.01 0.02	0.99 0.98	0 (0.000) 0 (0.000)	54 (0.029) 54 (0.032)	1817 (0.971) 1627 (0.968)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		A-Allele	C-Allele	A/A (frequency)	A/C (frequency)	C/C (frequency)
Caucasian
rs12664889	Sweden	MS CTR	0.14 0.15	0.86 0.85	31 (0.017) 37 (0.022)	452 (0.247) 409 (0.247)	1347 (0.736) 1207 (0.730)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian
rs276466	Sweden	MS CTR	0.23 0.23	0.77 0.77	108 (0.061) 98 (0.059)	588 (0.331) 559 (0.337)	1081 (0.608) 1002 (0.604)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		A-Allele	G-Allele	A/A (frequency)	A/G (frequency)	G/G (frequency)
Caucasian
rs10457018	Sweden	MS CTR	0.17 0.16	0.83 0.84	46 (0.025) 40 (0.024)	528 (0.286) 444 (0.269)	1270 (0.689) 1169 (0.707)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	A-Allele	T/T (frequency)	T/A (frequency)	A/A (frequency)
Caucasian
rs12194034	Sweden	MS CTR	0.17 0.16	0.83 0.84	48 (0.026) 44 (0.026)	512 (0.281) 453 (0.269)	1261 (0.692) 1190 (0.705)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		m-Allele	M-Allele	m/m (frequency)	m/M (frequency)	M/M (frequency)
Caucasian
rs13217897	Sweden	MS CTR	0.45 0.48	0.55 0.52	379 (0.205) 372 (0.224)	914 (0.495) 860 (0.518)	552 (0.299) 428 (0.258)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Caucasian
rs17066107	Sweden	MS CTR	0.04 0.04	0.96 0.96	4 (0.002) 4 (0.002)	153 (0.081) 116 (0.069)	1734 (0.917) 1565 (0.929)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		m-Allele	M-Allele	m/m (frequency)	m/M (frequency)	M/M (frequency)
Caucasian
rs1961618	Sweden	MS CTR	0.45 0.44	0.55 0.56	350 (0.190) 323 (0.193)	945 (0.512) 830 (0.495)	551 (0.298) 524 (0.312)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Caucasian
rs202562	Sweden	MS CTR	0.06 0.05	0.94 0.95	7 (0.004) 7 (0.004)	207 (0.109) 166 (0.098)	1683 (0.887) 1519 (0.898)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		m-Allele	M-Allele	m/m (frequency)	m/M (frequency)	M/M (frequency)
Caucasian
rs202563	Sweden	MS CTR	0.17 0.17	0.83 0.83	39 (0.021) 46 (0.027)	560 (0.298) 475 (0.283)	1281 (0.681) 1157 (0.690)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		A-Allele	C-Allele	A/A (frequency)	A/C (frequency)	C/C (frequency)
Caucasian
rs202566	Sweden	MS CTR	0.01 0.02	0.99 0.98	0 (0.000) 0 (0.000)	49 (0.026) 53 (0.032)	1825 (0.974) 1623 (0.968)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Caucasian
rs2038610	Sweden	MS CTR	0.16 0.16	0.84 0.84	43 (0.023) 45 (0.027)	512 (0.272) 464 (0.275)	1330 (0.706) 1178 (0.698)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		m-Allele	M-Allele	m/m (frequency)	m/M (frequency)	M/M (frequency)
Caucasian
rs276474	Norway	MS CTR	- -	- -	0 (-) 0 (-)	0 (-) 0 (-)	0 (-) 0 (-)
rs276474	Sweden	MS CTR	0.45 0.48	0.55 0.52	362 (0.204) 377 (0.224)	880 (0.497) 875 (0.521)	530 (0.299) 429 (0.255)

(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian
rs580397	Sweden	MS CTR	0.16 0.16	0.84 0.84	44 (0.024) 42 (0.025)	486 (0.263) 451 (0.271)	1317 (0.713) 1170 (0.704)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		m-Allele	M-Allele	m/m (frequency)	m/M (frequency)	M/M (frequency)
Caucasian
rs72761	Sweden	MS CTR	0.46 0.49	0.54 0.51	403 (0.213) 399 (0.236)	941 (0.497) 869 (0.513)	548 (0.290) 426 (0.251)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	C-Allele	G/G (frequency)	G/C (frequency)	C/C (frequency)
Caucasian
rs85462	Sweden	MS CTR	0.24 0.23	0.76 0.77	120 (0.065) 98 (0.059)	662 (0.360) 570 (0.345)	1059 (0.575) 982 (0.595)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		A-Allele	G-Allele	A/A (frequency)	A/G (frequency)	G/G (frequency)
Caucasian
rs9484001	Sweden	MS CTR	0.14 0.14	0.86 0.86	32 (0.017) 35 (0.021)	468 (0.248) 417 (0.248)	1386 (0.735) 1230 (0.731)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian
rs9494674	Sweden	MS CTR	0.14 0.15	0.86 0.85	34 (0.018) 40 (0.024)	466 (0.253) 419 (0.250)	1345 (0.729) 1217 (0.726)

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