MSGene

MSGene - Polymorphism Details

Study:

Moins-Teisserenc, 1995

Gene:

TAP1 (DAAP-57C1.5; ABC17; ABCB2; APT1; D6S114E; FLJ26666; FLJ41500; PSF1; RING4; TAP1*0102N; TAP1N)

View on AlzGene

Protein:

transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) (ABC transporter, MHC 1; ATP-binding cassette sub-family B member 2; ATP-binding cassette, sub-family B (MDR/TAP), member 2; PSF-1; antigen peptide transporter 1; peptide supply factor 1; peptide transporter PSF1; peptide transporter TAP1; peptide transporter involved in antigen processing 1; really interesting new gene 4 protein; transporter 1, ATP-binding cassette, sub-family B; transporter associated with antigen processing; transporter, ATP-binding cassette, major histocompatibility complex, 1)

Chromosome:

6 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 2

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		V-Allele	I-Allele	V/V (frequency)	V/I (frequency)	I/I (frequency)
Caucasian
rs1057141 (I333V)	France	MS CTR	0.20 0.13	0.80 0.87	4 (0.038) 1 (0.024)	33 (0.317) 9 (0.220)	67 (0.644) 31 (0.756)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian
rs1135216 (D637G)	France	MS CTR	0.14 0.11	0.86 0.89	2 (0.019) 0 (0.000)	26 (0.250) 9 (0.220)	76 (0.731) 32 (0.780)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

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