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MSGene - Polymorphism Details

Study:

Gomez-Lira, 2002

Gene:

MOG (DAQB-92E24.2; MGC26137; MOGIG2)

View on SZGene

Protein:

myelin oligodendrocyte glycoprotein (MOG Ig-AluB; myelin-oligodendrocyte glycoprotein)

Chromosome:

6 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 6

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		A-Allele	G-Allele	A/A (frequency)	A/G (frequency)	G/G (frequency)
Caucasian
rs116298651 (IVS4-571+68A/G)	Italy	MS CTR	0.13 0.23	0.87 0.77	1 (0.017) 7 (0.056)	13 (0.220) 43 (0.347)	45 (0.763) 74 (0.597)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		m-Allele	M-Allele	m/m (frequency)	m/M (frequency)	M/M (frequency)
Caucasian
rs116694381 (IVS4-571+77C/T)	Italy	MS CTR	0.06 0.06	0.94 0.94	0 (0.000) 0 (0.000)	6 (0.120) 6 (0.120)	44 (0.880) 44 (0.880)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		G-Allele	C-Allele	G/G (frequency)	G/C (frequency)	C/C (frequency)
Caucasian
rs17178119 (IVS4-571+92C/G)	Italy	MS CTR	0.05 0.04	0.95 0.96	0 (0.000) 0 (0.000)	5 (0.100) 4 (0.080)	45 (0.900) 46 (0.920)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian
rs1122947 (IVS6-710-44A/G)	Italy	MS CTR	0.22 0.21	0.78 0.79	2 (0.040) 2 (0.040)	18 (0.360) 17 (0.340)	30 (0.600) 31 (0.620)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		C-Allele	G-Allele	C/C (frequency)	C/G (frequency)	G/G (frequency)
Caucasian
rs2857766 (V142L)	Italy	MS CTR	0.13 0.23	0.87 0.77	1 (0.017) 7 (0.056)	13 (0.220) 43 (0.347)	45 (0.763) 74 (0.597)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		A-Allele	G-Allele	A/A (frequency)	A/G (frequency)	G/G (frequency)
Caucasian
rs3130250 (S5S)	Italy	MS CTR	0.17 0.20	0.83 0.80	1 (0.020) 2 (0.040)	15 (0.300) 16 (0.320)	34 (0.680) 32 (0.640)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

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MSGene Top Results

Top Results Details

1.	HLA-DRB1
2.	IL2RA
3.	IL7R
4.	TAGAP
5.	CLEC16A
6.	EVI5
7.	GWA_16q24.1
8.	GWA_5p13.1
9.	TTC34
10.	AHI1 [see more] [close]

MSGene Stats

Studies: 789
Genes: 809
Polymorphisms: 2907
Meta-analyses: 324

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