MSGene

MSGene - Polymorphism Details

Study:

Semana, 1997

Gene:

IL1RN (DIRA; ICIL-1RA; IL-1ra3; IL1F3; IL1RA; IRAP; MGC10430; MVCD4) View on AlzGene View on PDGene View on SZGene

Protein:

interleukin 1 receptor antagonist(IL1RN (IL1F3); OTTHUMP00000203730; intracellular IL-1 receptor antagonist type II; intracellular interleukin-1 receptor antagonist (icIL-1ra); type II interleukin-1 receptor antagonist)

Chromosome:

2 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 3

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		other-Allele	1-Allele	other/other (frequency)	other/1 (frequency)	1/1 (frequency)
Caucasian
*rs22346631 (86bpVNTR)**	France	MS CTR	0.45 0.33	0.55 0.67	15 (0.195) 18 (0.108)	39 (0.506) 74 (0.443)	23 (0.299) 75 (0.449)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		2-Allele	other-Allele	2/2 (frequency)	2/other (frequency)	other/other (frequency)
Caucasian
*rs22346632 (86bpVNTR)**	France	MS CTR	0.40 0.32	0.60 0.68	12 (0.156) 17 (0.101)	37 (0.481) 72 (0.429)	28 (0.364) 79 (0.470)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		3-Allele	other-Allele	3/3 (frequency)	3/other (frequency)	other/other (frequency)
Caucasian
*rs22346633 (86bpVNTR)**	France	MS CTR	0.05 0.01	0.95 0.99	0 (0.000) 0 (0.000)	8 (0.104) 4 (0.024)	69 (0.896) 163 (0.976)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Family-Based Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		other-Allele	1-Allele	other/other (frequency)	other/1 (frequency)	1/1 (frequency)
Caucasian
*rs22346631 (86bpVNTR)**	France	MS CTR	- -	- -	0 (-) 0 (-)	0 (-) 0 (-)	0 (-) 0 (-)

(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Family-Based Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		2-Allele	other-Allele	2/2 (frequency)	2/other (frequency)	other/other (frequency)
Caucasian
*rs22346632 (86bpVNTR)**	France	MS CTR	- -	- -	0 (-) 0 (-)	0 (-) 0 (-)	0 (-) 0 (-)
*rs22346632 (86bpVNTR)**	France	MS CTR	- -	- -	0 (-) 0 (-)	0 (-) 0 (-)	0 (-) 0 (-)

(-) : Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

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