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MSGene - Polymorphism Details
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 Study: Heidari, 2010
 Gene: CTLA4  (CD; CD152; CELIAC3; CTLA-4; GSE; IDDM12)  Entrez Gene    View on SZGene
 Protein: cytotoxic T-lymphocyte-associated protein 4  (celiac disease 3; cytotoxic T-lymphocyte-associated antigen 4; cytotoxic T-lymphocyte-associated serine esterase-4; ligand and transmembrane spliced cytotoxic T lymphocyte associated antigen 4)  ProteinLink
 Chromosome: 2   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 25 November 2011
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 3

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Other/Mixed
rs231775 (49A/G) Iran MS
CTR
0.43
0.44
0.57
0.56
24 (0.178)
23 (0.170)
69 (0.511)
74 (0.548)
42 (0.311)
38 (0.281)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Other/Mixed
rs5742909 (-318C/T) Iran MS
CTR
0.10
0.12
0.90
0.88
3 (0.022)
1 (0.007)
20 (0.148)
31 (0.230)
112 (0.830)
103 (0.763)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Other/Mixed
CTLA4_6230A/G Iran MS
CTR
0.45
0.44
0.55
0.56
23 (0.170)
29 (0.215)
75 (0.556)
62 (0.459)
37 (0.274)
44 (0.326)
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MSGene Recent Updates
MSGene Top Results
Top Results Details
1. HLA-DRB1
2. IL2RA
3. IL7R
4. TAGAP
5. CLEC16A
6. EVI5
7. GWA_16q24.1
8. GWA_5p13.1
9. TTC34
10. AHI1   
[see more]
MSGene Stats
Studies: 789
Genes: 809
Polymorphisms: 2907
Meta-analyses: 324
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