MSGene

MSGene - Polymorphism Details

Study:

Fukazawa, 2005

Gene:

CTLA4 (CD; CD152; CELIAC3; CTLA-4; GSE; IDDM12)

View on SZGene

Protein:

cytotoxic T-lymphocyte-associated protein 4 (celiac disease 3; cytotoxic T-lymphocyte-associated antigen 4; cytotoxic T-lymphocyte-associated serine esterase-4; ligand and transmembrane spliced cytotoxic T lymphocyte associated antigen 4)

Chromosome:

2 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 2

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Asian
rs231775 (49A/G)	Japan	MS CTR	0.57 0.60	0.43 0.40	41 (0.308) 61 (0.391)	69 (0.519) 66 (0.423)	23 (0.173) 29 (0.186)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Asian
rs5742909 (-318C/T)	Japan	MS CTR	0.13 0.12	0.87 0.88	1 (0.008) 4 (0.026)	32 (0.241) 28 (0.179)	100 (0.752) 124 (0.795)

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