MSGene

MSGene - Polymorphism Details

Study:

Greve, 2007

Gene:

CTLA4 (CD; CD152; CELIAC3; CTLA-4; GSE; IDDM12)

View on SZGene

Protein:

cytotoxic T-lymphocyte-associated protein 4 (celiac disease 3; cytotoxic T-lymphocyte-associated antigen 4; cytotoxic T-lymphocyte-associated serine esterase-4; ligand and transmembrane spliced cytotoxic T lymphocyte associated antigen 4)

Chromosome:

2 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 2

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian
rs231775 (49A/G)	Germany	MS CTR	0.40 0.38	0.60 0.62	36 (0.180) 70 (0.149)	88 (0.440) 221 (0.471)	76 (0.380) 178 (0.380)
rs231775 (49A/G)	Hungary	MS CTR	0.42 0.38	0.58 0.62	33 (0.171) 11 (0.121)	96 (0.497) 48 (0.527)	64 (0.332) 32 (0.352)
rs231775 (49A/G)	Poland	MS CTR	0.41 0.45	0.59 0.55	25 (0.139) 32 (0.187)	96 (0.533) 90 (0.526)	59 (0.328) 49 (0.287)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		A-Allele	G-Allele	A/A (frequency)	A/G (frequency)	G/G (frequency)
Caucasian
rs3087243 (CT60)	Poland	MS CTR	0.38 0.36	0.63 0.64	28 (0.149) 15 (0.079)	85 (0.452) 105 (0.553)	75 (0.399) 70 (0.368)
rs3087243 (CT60)	Hungary	MS CTR	0.40 0.41	0.60 0.59	33 (0.160) 17 (0.121)	97 (0.471) 82 (0.582)	76 (0.369) 42 (0.298)
rs3087243 (CT60)	Germany	MS CTR	0.43 0.44	0.57 0.56	39 (0.172) 94 (0.199)	118 (0.520) 232 (0.490)	70 (0.308) 147 (0.311)

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