MSGene

MSGene - Polymorphism Details

Study:

Yousefipour, 2009

Gene:

CTLA4 (CD; CD152; CELIAC3; CTLA-4; GSE; IDDM12)

View on SZGene

Protein:

cytotoxic T-lymphocyte-associated protein 4 (celiac disease 3; cytotoxic T-lymphocyte-associated antigen 4; cytotoxic T-lymphocyte-associated serine esterase-4; ligand and transmembrane spliced cytotoxic T lymphocyte associated antigen 4)

Chromosome:

2 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 4

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Other/Mixed
rs231775 (49A/G)	Iran	MS CTR	0.30 0.23	0.70 0.77	18 (0.118) 14 (0.074)	56 (0.366) 59 (0.311)	79 (0.516) 117 (0.616)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Other/Mixed
rs5742909 (-318C/T)	Iran	MS CTR	0.08 0.08	0.92 0.92	3 (0.020) 3 (0.016)	20 (0.131) 24 (0.130)	130 (0.850) 157 (0.853)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Other/Mixed
rs4553808 (-1661)	Iran	MS CTR	0.18 0.13	0.82 0.87	3 (0.020) 7 (0.037)	49 (0.320) 36 (0.191)	101 (0.660) 145 (0.771)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Other/Mixed
rs733618 (-1722)	Iran	MS CTR	0.10 0.06	0.90 0.94	0 (0.000) 0 (0.000)	30 (0.196) 24 (0.127)	123 (0.804) 165 (0.873)

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