MSGene

MSGene - Polymorphism Details

Study:

Caillier, 2008

Gene:

AGER (DAMA-358M23.4; MGC22357; RAGE) View on AlzGene View on SZGene

Protein:

advanced glycosylation end product-specific receptor(receptor for advanced glycosylation end-products)

Chromosome:

6 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 3

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		A-Allele	G-Allele	A/A (frequency)	A/G (frequency)	G/G (frequency)
African Descent
rs2070600 (G82S)	USA	MS CTR	0.01 0.02	0.99 0.98	0 (0.000) 0 (0.000)	12 (0.016) 26 (0.032)	757 (0.984) 778 (0.968)
Caucasian
rs2070600 (G82S)	Overlaps with Baranzini, 2008 (USA)	MS CTR	- -	- -	0 (-) 0 (-)	0 (-) 0 (-)	0 (-) 0 (-)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
African Descent
rs1035798	USA	MS CTR	0.04 0.07	0.96 0.93	1 (0.001) 4 (0.005)	52 (0.068) 102 (0.127)	716 (0.931) 698 (0.868)
Caucasian
rs1035798	Overlaps with Baranzini, 2008 (USA)	MS CTR	- -	- -	0 (-) 0 (-)	0 (-) 0 (-)	0 (-) 0 (-)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		T-Allele	G-Allele	T/T (frequency)	T/G (frequency)	G/G (frequency)
African Descent
rs184003	USA	MS CTR	0.21 0.20	0.79 0.80	35 (0.046) 31 (0.039)	259 (0.337) 254 (0.317)	475 (0.618) 517 (0.645)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

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