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MSGene - Polymorphism Details
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 Study: Weinshenker, 2001
 Gene: TGFB1 (CED; DPD1; TGFB; TGFbeta)   View on AlzGene   View on PDGene
 Protein: transforming growth factor, beta 1(TGF-beta 1 protein; diaphyseal dysplasia 1, progressive; transforming growth factor-beta 1)
 Chromosome: 19   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 31 January 2011
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 6

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   A-Allele G-Allele A/A
(frequency)
A/G
(frequency)
G/G
(frequency)
 Caucasian
rs1800468 (-800G/A) USA MS
CTR
0.06
0.07
0.94
0.93
0 (0.000)
1 (0.004)
15 (0.124)
33 (0.137)
106 (0.876)
207 (0.859)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs1800469 (-509C/T) USA MS
CTR
0.29
0.27
0.71
0.73
8 (0.067)
15 (0.061)
53 (0.442)
102 (0.418)
59 (0.492)
127 (0.520)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs1800470 (L10P) USA MS
CTR
0.39
0.36
0.61
0.64
19 (0.160)
31 (0.128)
54 (0.454)
111 (0.457)
46 (0.387)
101 (0.416)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele G-Allele C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
 Caucasian
rs1800471 (R25P) USA MS
CTR
0.06
0.08
0.94
0.92
0 (0.000)
1 (0.004)
15 (0.126)
37 (0.152)
104 (0.874)
206 (0.844)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   ins-Allele del-Allele ins/ins
(frequency)
ins/del
(frequency)
del/del
(frequency)
 Caucasian
TGFB1_78indel USA MS
CTR
0.10
0.09
0.90
0.91
0 (0.000)
1 (0.004)
23 (0.190)
42 (0.176)
98 (0.810)
196 (0.820)


Family-Based Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs1800469 (-509C/T) USA MS
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Family-Based Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele G-Allele C/C
(frequency)
C/G
(frequency)
G/G
(frequency)
 Caucasian
rs1800471 (R25P) USA MS
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Family-Based Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   C-Allele T-Allele C/C
(frequency)
C/T
(frequency)
T/T
(frequency)
 Caucasian
rs9282871 (L10P) USA MS
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
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MSGene Stats
Studies: 789
Genes: 809
Polymorphisms: 2907
Meta-analyses: 324
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