MSGene

MSGene - Polymorphism Details

Study:

Harangi, 2005

Gene:

HMHA1 (HA-1; HLA-HA1; KIAA0223)

Protein:

histocompatibility (minor) HA-1(minor histocompatibility antigen HA-1)

Chromosome:

19 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 10 April 2010

Total number of polymorphisms investigated by this study: 3

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		CA-Allele	TG-Allele	CA/CA (frequency)	CA/TG (frequency)	TG/TG (frequency)
Caucasian
rs1801284 (H168R)	Germany (Women)	MS CTR	0.28 0.39	0.72 0.61	2 (0.087) 39 (0.133)	9 (0.391) 150 (0.512)	12 (0.522) 104 (0.355)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	A-Allele	T/T (frequency)	T/A (frequency)	A/A (frequency)
Caucasian
rs2074442 (D288E)	Germany (Women)	MS CTR	0.31 0.21	0.69 0.79	4 (0.167) 12 (0.046)	7 (0.292) 86 (0.327)	13 (0.542) 165 (0.627)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian
rs7251797 (G468S)	Germany (Women)	MS CTR	0.41 0.43	0.59 0.57	0 (0.000) 0 (0.000)	19 (0.826) 244 (0.850)	4 (0.174) 43 (0.150)

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