MSGene

MSGene - Polymorphism Details

Study:

Gade-Andavolu, 2004

Gene:

CCL5 (D17S136E; MGC17164; RANTES; SCYA5; SISd; TCP228) View on AlzGene View on PDGene

Protein:

chemokine (C-C motif) ligand 5(OTTHUMP00000197106; SIS-delta; T-cell specific RANTES protein; T-cell specific protein p288; beta-chemokine RANTES; regulated upon activation, normally T-expressed, and presumably secreted; small inducible cytokine A5; small inducible cytokine A5 (RANTES); small inducible cytokine subfamily A (Cys-Cys), member 5)

Chromosome:

17 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 2

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Caucasian
rs2107538 (-403C/T)	USA	MS CTR	0.24 0.12	0.76 0.88	12 (0.086) 2 (0.009)	43 (0.307) 47 (0.218)	85 (0.607) 167 (0.773)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	C-Allele	G/G (frequency)	G/C (frequency)	C/C (frequency)
Caucasian
rs2280788 (-28C/G)	USA	MS CTR	0.05 0.03	0.95 0.97	1 (0.007) 0 (0.000)	13 (0.093) 12 (0.056)	126 (0.900) 204 (0.944)

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