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MSGene - Polymorphism Details
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 Study: Nelissen, 2000
 Gene: MMP9 (CLG4B; GELB; MMP-9)   View on ALSGene   View on AlzGene   View on SZGene
 Protein: matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)(macrophage gelatinase; matrix metalloproteinase 9; matrix metalloproteinase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase); type V collagenase)
 Chromosome: 20   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 25 November 2011
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 2

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   T-Allele C-Allele T/T
(frequency)
T/C
(frequency)
C/C
(frequency)
 Caucasian
rs3918244 (-1562C/T) Sweden MS
CTR
0.15
0.16
0.85
0.84
5 (0.025)
4 (0.027)
51 (0.256)
40 (0.274)
143 (0.719)
102 (0.699)


Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   n.a.-Allele n.a.-Allele n.a./n.a.
(frequency)
n.a./n.a.
(frequency)
n.a./n.a.
(frequency)
 Caucasian
rs72370883 (2bpSTR) Sweden MS
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).

Family-Based Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   n.a.-Allele n.a.-Allele n.a./n.a.
(frequency)
n.a./n.a.
(frequency)
n.a./n.a.
(frequency)
 Caucasian
rs72370883 (2bpSTR) Italy (Sardinia) MS
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
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MSGene Recent Updates
MSGene Top Results
Top Results Details
1. HLA-DRB1
2. IL2RA
3. IL7R
4. TAGAP
5. CLEC16A
6. EVI5
7. GWA_16q24.1
8. GWA_5p13.1
9. TTC34
10. AHI1   
[see more]
MSGene Stats
Studies: 789
Genes: 809
Polymorphisms: 2907
Meta-analyses: 324
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