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MSGene - Polymorphism Details
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 Study: Pandit, 2010
 Gene: CLEC16A  (Gop-1; KIAA0350; MGC111457)  Entrez Gene
 Protein: C-type lectin domain family 16, member A   ProteinLink
 Chromosome: 16   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 25 November 2011
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 2

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Other/Mixed
rs6498169 (intron22) India MS
CTR
0.29
0.23
0.71
0.77
17 (0.086)
10 (0.051)
81 (0.411)
70 (0.355)
99 (0.503)
117 (0.594)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
  Genotypes*
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Other/Mixed
rs12708716 (intron19) India MS
CTR
0.36
0.45
0.64
0.55
26 (0.132)
41 (0.207)
91 (0.462)
98 (0.495)
80 (0.406)
59 (0.298)
*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.
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MSGene Recent Updates
MSGene Top Results
Top Results Details
1. HLA-DRB1
2. IL2RA
3. IL7R
4. TAGAP
5. CLEC16A
6. EVI5
7. GWA_16q24.1
8. GWA_5p13.1
9. TTC34
10. AHI1   
[see more]
MSGene Stats
Studies: 789
Genes: 809
Polymorphisms: 2907
Meta-analyses: 324
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