MSGene

MSGene - Polymorphism Details

Study:

Zhang, 2005

Gene:

LAG3 (CD223)

Protein:

lymphocyte-activation gene 3(lymphocyte-activation protein 3)

Chromosome:

12 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 9

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	T-Allele	G/G (frequency)	G/T (frequency)	T/T (frequency)
Caucasian
rs11227	Sweden	MS CTR	0.38 0.40	0.62 0.60	90 (0.142) 107 (0.165)	295 (0.466) 306 (0.471)	248 (0.392) 237 (0.365)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Caucasian
rs1882545	Sweden	MS CTR	0.33 0.34	0.67 0.66	68 (0.106) 82 (0.125)	291 (0.455) 280 (0.426)	280 (0.438) 296 (0.450)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	G-Allele	C/C (frequency)	C/G (frequency)	G/G (frequency)
Caucasian
rs1882551	Sweden	MS CTR	0.29 0.30	0.71 0.70	50 (0.078) 22 (0.081)	268 (0.421) 116 (0.428)	319 (0.501) 133 (0.491)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Caucasian
rs1922452	Sweden	MS CTR	0.37 0.41	0.63 0.59	85 (0.133) 115 (0.176)	296 (0.464) 308 (0.471)	257 (0.403) 231 (0.353)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Caucasian
rs2365095	Sweden	MS CTR	0.32 0.34	0.68 0.66	61 (0.104) 68 (0.108)	247 (0.423) 293 (0.464)	276 (0.473) 271 (0.429)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		GTTA-Allele	del-Allele	GTTA/GTTA (frequency)	GTTA/del (frequency)	del/del (frequency)
Caucasian
rs25557	Sweden	MS CTR	0.18 0.20	0.82 0.80	27 (0.042) 11 (0.041)	181 (0.285) 82 (0.308)	428 (0.673) 173 (0.650)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		A-Allele	C-Allele	A/A (frequency)	A/C (frequency)	C/C (frequency)
Caucasian
rs7488113	Sweden	MS CTR	0.04 0.03	0.96 0.97	0 (0.000) 0 (0.000)	20 (0.071) 19 (0.069)	263 (0.929) 258 (0.931)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Caucasian
rs870849	Sweden	MS CTR	0.38 0.35	0.63 0.65	92 (0.160) 77 (0.116)	248 (0.431) 309 (0.467)	236 (0.410) 276 (0.417)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	T-Allele	G/G (frequency)	G/T (frequency)	T/T (frequency)
Caucasian
rs951818	Sweden	MS CTR	0.37 0.42	0.63 0.58	91 (0.143) 119 (0.183)	294 (0.463) 305 (0.470)	250 (0.394) 225 (0.347)

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