MSGene

MSGene - Polymorphism Details

Study:

Zhang, 2005

Gene:

SPP1 (BNSP; BSPI; ETA-1; MGC110940; OPN)

View on SZGene

Protein:

secreted phosphoprotein 1 (SPP1/CALPHA1 fusion; bone sialoprotein I; early T-lymphocyte activation 1; osteopontin; osteopontin/immunoglobulin alpha 1 heavy chain constant region fusion protein; secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1); secreted phosphoprotein-1 (osteopontin, bone sialoprotein))

Chromosome:

4 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 2

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Caucasian
rs1126616 (795C/T)	Sweden	MS CTR	0.30 0.28	0.70 0.72	22 (0.101) 16 (0.083)	87 (0.401) 75 (0.389)	108 (0.498) 102 (0.528)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Caucasian
rs4754 (327T/C)	Sweden	MS CTR	0.28 0.26	0.72 0.74	25 (0.089) 19 (0.073)	105 (0.374) 96 (0.368)	151 (0.537) 146 (0.559)

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