MSGene

MSGene - Polymorphism Details

Study:

Alcina, 2010

Gene:

EVI5 (NB4S)

Protein:

ecotropic viral integration site 5 (dJ846D11.1 (ecotropic viral integration site 5); neuroblastoma stage 4S)

Chromosome:

1 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 6

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	A-Allele	T/T (frequency)	T/A (frequency)	A/A (frequency)
Caucasian
rs6680578	Spain	MS CTR	0.47 0.41	0.53 0.59	161 (0.220) 153 (0.169)	359 (0.490) 440 (0.485)	212 (0.290) 314 (0.346)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		A-Allele	C-Allele	A/A (frequency)	A/C (frequency)	C/C (frequency)
Caucasian
rs11808092	Spain	MS CTR	0.32 0.28	0.68 0.72	73 (0.102) 71 (0.080)	319 (0.444) 364 (0.409)	327 (0.455) 454 (0.511)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Caucasian
rs11804321	Spain	MS CTR	0.23 0.18	0.77 0.82	34 (0.050) 26 (0.030)	245 (0.360) 261 (0.303)	402 (0.590) 575 (0.667)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		A-Allele	G-Allele	A/A (frequency)	A/G (frequency)	G/G (frequency)
Caucasian
rs6603984	Spain	MS CTR	0.20 0.19	0.80 0.81	29 (0.040) 36 (0.040)	232 (0.320) 282 (0.310)	463 (0.640) 593 (0.651)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Caucasian
rs17380378	Spain	MS CTR	0.10 0.10	0.90 0.90	7 (0.010) 9 (0.010)	126 (0.182) 159 (0.180)	558 (0.808) 713 (0.809)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Caucasian
rs2391199	Spain	MS CTR	0.09 0.09	0.91 0.91	7 (0.010) 9 (0.010)	105 (0.152) 141 (0.160)	581 (0.838) 734 (0.830)

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