MSGene

MSGene - Polymorphism Details

Study:

Hoe, 2010

Gene:

IL7R (ILRA; IL7R; IL-7R-alpha; CDW127; IL7RA; CD127)

Protein:

interleukin 7 receptor

Chromosome:

5 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 4

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Caucasian
rs6897932	Australia (Westmead)	MS CTR	0.24 0.24	0.76 0.76	46 (0.057) 59 (0.060)	294 (0.363) 366 (0.369)	470 (0.580) 566 (0.571)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian
rs11567686 (-449G/A)	Australia (Westmead)	MS CTR	0.35 0.34	0.65 0.66	102 (0.126) 112 (0.113)	370 (0.457) 442 (0.446)	338 (0.417) 437 (0.441)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Caucasian
rs11567685 (-504T/C)	Australia (Westmead)	MS CTR	0.26 0.27	0.74 0.73	56 (0.069) 71 (0.072)	313 (0.386) 389 (0.393)	441 (0.544) 531 (0.536)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

Case-Control Studies (by ethnic group)
					Genotypes*
Polymorphism ID# (Link to NCBI)	Population		T-Allele	G-Allele	T/T (frequency)	T/G (frequency)	G/G (frequency)
Caucasian
rs7718919	Australia (Westmead)	MS CTR	0.15 0.15	0.85 0.85	17 (0.021) 23 (0.023)	202 (0.249) 255 (0.257)	591 (0.730) 713 (0.719)

*Genotypes have been calculated from allele frequencies assuming Hardy-Weinberg equilibrium.

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