MSGene

MSGene - Polymorphism Details

Study:

Lundmark, 2007

Gene:

IL7R (ILRA; IL7R; IL-7R-alpha; CDW127; IL7RA; CD127)

Protein:

interleukin 7 receptor

Chromosome:

5 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Total number of polymorphisms investigated by this study: 14

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Caucasian
rs6897932	Sweden	MS CTR	0.26 0.30	0.74 0.70	82 (0.071) 115 (0.095)	423 (0.369) 500 (0.413)	642 (0.560) 595 (0.492)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	G-Allele	T/T (frequency)	T/G (frequency)	G/G (frequency)
Caucasian
rs11567701	Sweden	MS CTR	0.27 0.26	0.73 0.74	97 (0.084) 68 (0.057)	427 (0.368) 483 (0.402)	636 (0.548) 651 (0.542)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian
rs3194051	Sweden,Norway,Denmark,Finland	MS CTR	0.27 0.25	0.73 0.75	149 (0.083) 152 (0.059)	657 (0.368) 982 (0.383)	979 (0.548) 1430 (0.558)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Caucasian
rs6871748	Sweden	MS CTR	0.26 0.31	0.74 0.69	84 (0.073) 113 (0.094)	433 (0.375) 510 (0.424)	638 (0.552) 579 (0.482)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Caucasian
rs1494555	Sweden	MS CTR	0.33 0.31	0.67 0.69	123 (0.108) 108 (0.089)	499 (0.437) 524 (0.432)	521 (0.456) 581 (0.479)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	A-Allele	T/T (frequency)	T/A (frequency)	A/A (frequency)
Caucasian
rs987106	Sweden,Norway,Denmark,Finland	MS CTR	0.48 0.45	0.52 0.55	424 (0.241) 519 (0.201)	848 (0.483) 1278 (0.495)	485 (0.276) 784 (0.304)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	C-Allele	T/T (frequency)	T/C (frequency)	C/C (frequency)
Caucasian
rs987107	Sweden,Norway,Denmark,Finland	MS CTR	0.27 0.25	0.73 0.75	152 (0.085) 157 (0.061)	651 (0.366) 991 (0.386)	976 (0.549) 1417 (0.552)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Caucasian
rs10058453	Sweden	MS CTR	0.33 0.31	0.67 0.69	124 (0.108) 105 (0.088)	515 (0.447) 525 (0.438)	512 (0.445) 568 (0.474)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	T-Allele	C/C (frequency)	C/T (frequency)	T/T (frequency)
Caucasian
rs10461959	Sweden	MS CTR	0.20 0.20	0.80 0.80	52 (0.045) 45 (0.038)	356 (0.311) 374 (0.317)	737 (0.644) 759 (0.644)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	T-Allele	G/G (frequency)	G/T (frequency)	T/T (frequency)
Caucasian
rs11567698	Sweden	MS CTR	0.13 0.11	0.87 0.89	14 (0.012) 11 (0.009)	273 (0.237) 247 (0.204)	864 (0.751) 950 (0.786)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		C-Allele	A-Allele	C/C (frequency)	C/A (frequency)	A/A (frequency)
Caucasian
rs13169780	Sweden	MS CTR	0.14 0.13	0.86 0.87	23 (0.020) 18 (0.015)	286 (0.246) 290 (0.240)	853 (0.734) 900 (0.745)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		A-Allele	T-Allele	A/A (frequency)	A/T (frequency)	T/T (frequency)
Caucasian
rs2303137	Sweden	MS CTR	0.41 0.46	0.59 0.54	188 (0.161) 245 (0.204)	575 (0.494) 610 (0.507)	402 (0.345) 348 (0.289)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		T-Allele	A-Allele	T/T (frequency)	T/A (frequency)	A/A (frequency)
Caucasian
rs3777090	Sweden	MS CTR	0.33 0.30	0.67 0.70	125 (0.109) 104 (0.086)	508 (0.441) 524 (0.436)	519 (0.451) 575 (0.478)

Case-Control Studies (by ethnic group)
					Genotypes
Polymorphism ID# (Link to NCBI)	Population		G-Allele	A-Allele	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian
rs6870944	Sweden	MS CTR	0.15 0.15	0.85 0.85	24 (0.021) 27 (0.023)	308 (0.267) 315 (0.263)	820 (0.712) 857 (0.715)

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