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MSGene - Meta-Analysis of All Published MS Association Studies (Case-Control Only) rs1569723
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 Polymorphism: rs1569723
 Gene: CD40  (Bp50; CDW40; MGC9013; TNFRSF5; p50)  Entrez Gene    View on AlzGene
 Protein: CD40 molecule, TNF receptor superfamily member 5  (B cell surface antigen CD40; B cell-associated molecule; CD40 antigen; CD40 antigen (TNF receptor superfamily member 5); CD40 type II isoform; CD40L receptor; nerve growth factor receptor-related B-lymphocyte activation molecule; tumor necrosis factor receptor superfamily, member 5)  ProteinLink
 Chromosome: 20   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 25 November 2011
Gene Overview
 Polymorphism:
1) Summary of Allele and Genotype Distribution of all Published Association Studies (by Ethnic Group)
      Alleles Genotypes
  # Case-Control
Samples
  C-Allele
(frequency)
A-Allele
(frequency)
C/C
(frequency)
C/A
(frequency)
A/A
(frequency)
 Caucasian 3 MS
CTR
0.30
0.26
0.70
0.74
428 (0.090)
449 (0.068)
1975 (0.415)
2519 (0.382)
2353 (0.495)
3627 (0.550)
Total 3 MS
CTR
0.30
0.26
0.70
0.74
428 (0.090)
449 (0.068)
1975 (0.415)
2519 (0.382)
2353 (0.495)
3627 (0.550)

Meta-Analysis Methods      * New * Cumulative Meta-analysis
2) Forest plot for polymorphism  rs1569723

Please also see disclaimer for more information on these meta-analyses.


Meta-analyses have not been performed on the following polymorphisms since they lack published genotype data in at least four independent case-control samples, or the published genotype data was otherwise not eligible for inclusion (see methods for details):

rs1883832 (C/T-1)
rs6074022

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MSGene Recent Updates
MSGene Top Results
Top Results Details
1. HLA-DRB1
2. IL2RA
3. IL7R
4. TAGAP
5. CLEC16A
6. EVI5
7. GWA_16q24.1
8. GWA_5p13.1
9. TTC34
10. AHI1   
[see more]
MSGene Stats
Studies: 789
Genes: 809
Polymorphisms: 2907
Meta-analyses: 324
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An up-to-date collection of all published genetic association studies.
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