MSGene

MSGene - Meta-Analysis of All Published MS Association Studies (Case-Control Only) rs1893217

Polymorphism:

rs1893217

Gene:

PTPN2 (PTN2; PTPT; TC-PTP; TCELLPTP; TCPTP)

Protein:

protein tyrosine phosphatase, non-receptor type 2 (T-cell protein tyrosine phosphatase)

Chromosome:

18 (View: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT)

Status:

Updated 25 November 2011

Polymorphism:

1) Summary of Allele and Genotype Distribution of all Published Association Studies (by Ethnic Group)
			Alleles		Genotypes
	# Case-Control Samples		G-Allele (frequency)	A-Allele (frequency)	G/G (frequency)	G/A (frequency)	A/A (frequency)
Caucasian	5	MS CTR	0.15 0.16	0.85 0.84	178 (0.024) 308 (0.026)	1977 (0.261) 3328 (0.276)	5411 (0.715) 8402 (0.698)
Total	5	MS CTR	0.15 0.16	0.85 0.84	178 (0.024) 308 (0.026)	1977 (0.261) 3328 (0.276)	5411 (0.715) 8402 (0.698)