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MSGene - Gene overview of all published MS-association studies for IL1B
Gene:
IL1B
(IL-1; IL1-BETA; IL1F2)
View on AlzGene
View on PDGene
View on SZGene
Protein:
interleukin 1, beta
(catabolin; preinterleukin 1 beta; pro-interleukin-1-beta)
Chromosome:
2
(View:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
X
Y
MT
)
Status:
Updated 25 November 2011
; ***Note that the RFLP Ava I in
IL1B
commonly referred to as nucleotide acid position "-511" can be assigned to two restriction sites each harboring one SNP (rs16944 and rs3087258) that both affect the restriction. Therefore this RFLP is excluded from meta-analysis.***
1. Case-Control Studies (by ethnic group)
MS Cases
Normal Controls
Study
Population
Source
# Polys
# Subjects
(% women)
DX
Onset Age
(range)
Age
(range)
# Subjects
(% women)
Age
(range)
Result
Caucasian
Aggelakis, 2009
Greece
CL
2
(detail)
351
(66%)
MD1
32.1 + 9.4
(-)
40.8 + 10.9
(-)
375
(63%)
40.1 + 10.8
(-)
Negative
Baranzini, 2008
USA, Netherlands, Switzerland (GWAS)
CL
4
(detail)
978
(67%)
MD1&2
34
(11-61)
47
(21-69)
883
(66%)
46
(21-69)
Negative
Borzani, 2010
Italy
CL
6
(detail)
160
(68%)
MD1
-
40.9 + 8.5
(-)
250
(60%)
-
Positive
de Jong, 2002
Netherlands
CL
1
(detail)
75
(60%)
P
34 + 9
(-)
50 + 9
(-)
138
(-)
-
Negative
Dincic, 2006
Serbia
CL
1
(detail)
162
(62%)
MD1
29.9 + 9.3
(-)
36.5 + 10.7
(-)
103
(43%)
51.3 + 13.2
(-)
Negative
Ferri, 2000
Italy
CL
1
(detail)
321
(63%)
P
27.4 + 9.2
(-)
38 + 12
(-)
403
(36%)
38 + 10.9
(-)
Negative
Hooper-van Veen, 2003
Netherlands
CL
2
(detail)
492
(62%)
P
32 + 10
(-)
45 + 11
(-)
228
(-)
-
Negative
Kantarci, 2000
USA
CL,PO
1
(detail)
122
(43%)
U
29.6 + 8.9
(-)
48.3
(-)
244
(-)
-
Positive
Luomala, 2001
Finland
CL
2
(detail)
93
(53%)
P
32 + 8.1
(-)
-
400
(-)
-
Negative
Mann, 2002
UK
CL
4
(detail)
444
(69%)
O/M
32.2 + 9.1
(-)
44.6 + 10.1
(-)
151
(-)
-
Trend
Mirowska-Guzel, 2011
Poland
CL
1
(detail)
230
(73%)
MD1&2
29 + 9.9
(-)
38.1 + 10.9
(-)
195
(67%)
40 + 10.1
(-)
Positive
Motsinger, 2007
USA
CL
2
(detail)
421
(-)
MD1
-
-
96
(-)
-
Negative
Schrijver, 1999
Overlaps with
Hooper-van Veen, 2004
CL
1
(detail)
148
(58%)
P
33.3 + 10
(-)
-
98
(-)
-
n.a.
Zhang, 2005
Sweden
CL
1
(detail)
672
(72%)
P
31.5
(-)
45.6
(15-80)
672
(49%)
54.5
(17-91)
Negative
African Descent
Brassat, 2006
USA
CL
2
(detail)
442
(-)
MD1
-
-
293
(-)
-
Negative
Asian
Niino, 2001
Japan
CL
1
(detail)
98
(74%)
P
26.1 + 8.8
(-)
35.7 + 10.8
(-)
104
(82%)
32.7 + 9.2
(-)
Negative
Other/Mixed
Amirzargar, 2007
Iran
CL
2
(detail)
44
(68%)
P
-
-
140
(-)
-
Negative
Sarial, 2008
Iran
CL
2
(detail)
100
(70%)
U
38
(-)
35 + 7
(-)
140
(-)
-
Positive
Contact us
if you are an author of an association study regarding this gene and do not find your study in this table or find errors in the representation of your study details.
2. Family-Based Studies (by ethnic group)
Affecteds
Unaffecteds
Study
Population
# Polys
# Families
# Subjects
(% women)
DX
Onset Age
(range)
Age
(range)
# Subjects
(% women)
Age
(range)
Result
Caucasian
Barcellos, 2004
Overlaps with
Motsinger, 2007 (CC)
2
(detail)
337
337
(-)
U
-
-
-
-
Negative
Feakes, 2000
UK
1
(detail)
536
536
(75%)
P
25.5
(-)
38
(-)
1072
(50%)
-
Negative
Motsinger, 2007
Overlaps with
Motsinger, 2007 (CC)
2
(detail)
146
146
(-)
MD1
-
-
-
-
n.a.
Wansen, 1997
Finland
1
(detail)
106
106
(68%)
P
-
34
(17-52)
212
(50%)
-
Negative
Contact us
if you are an author of an association study regarding this gene and do not find your study in this table or find errors in the representation of your study details.
Source:
Source of case population -> “CL” (clinic-based), “PO” (population-based), or “CO” (community-based).
# Polys:
Number of polymorphisms tested per gene and per sample.
Onset Age and Age:
Mean or median age at onset or examination, respectively.
DX:
Criteria used to determine MS diagnosis -> "P" (Poser criteria, 1983), "MD1" (McDonald criteria, 2001), "MD2" (revised McDonald criteria, 2005), "MD1&2" (McDonald criteria, 2001 and 2005), "O/M" (other/mixed), "U" (Unknown).
Result:
Overall conclusion reached by authors of the original publication (“positive” usually indicates significant (P<0.05) association in at least one of the performed analyses, and “negative” indicates no evidence for significant association, while “trend” indicates results in between).
(-)
: Either no data provided or in case of overlap, data included in original study.
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MSGene Stats
Studies: 789
Genes: 809
Polymorphisms: 2907
Meta-analyses: 324
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